@rhimpr - I sure did - I follow the instructions like a cookbook - however, something went wrong the first time I uploaded the files and the .htaccess file was not there, so I repeated the process, then deleted it. What does that do anyway? If you delete before you run the upgrade script? I have never gotten that.
@Newton - interesting. Why would a cloned site upgrade any differently than a normal site? Someone must know.
The good news is I have everything backed up - database and all files. I basically want to just get up to 7.0.5 with the same site I had before - only about a dozen users but that is much easier than starting from scratch. Maybe a fresh install of 7.0.5 then modify from there? Problem is, it was a "full structure and content" backup of the database, not the individual tables, so could be a real mess.
Any ideas on how to recover from this would be appreciated.
Rob